Publications

Geistlinger L, Da Silva VH, Cesar A, Tizioto PC, Waldron L, Zimmer R, De Almeida Regitano LC, Coutinho L. Widespread modulation of gene expression by copy number variation in skeletal muscle. Scientific reports. (2018) 8:1399. DOI:10.1038/s41598-018-19782-4.

Gegenfurtner FA,  Jahn B, Wagner H, Ziegenhain C, Enard W, Geistlinger L, Rädler JO, Vollmar AM, Zahler S. Micropatterning as a tool to identify regulatory triggers and kinetics of actin-mediated endothelial mechanosensing. J Cell Sci 2018 : jcs.212886 doi: 10.1242/jcs.212886. Published 3 May 2018.

Silva VH, Regitano LC, Geistlinger L, Pertille F, Giacchetto PF, Brassaloti RA, Morosini NS, Zimmer R, Coutinho LL (2016) Genome-wide detection of CNVs and their association with meat tenderness in Nelore cattle. PLoS One, 11(6), e0157711.

Geistlinger L, Csaba G, Zimmer R (2016) Bioconductor’s EnrichmentBrowser: seamless navigation through combined results of set- & network-based enrichment analysis. BMC Bioinformatics, 17, 45.

Petri T, Altmann S, Geistlinger L, Zimmer R, Küffner R (2015) Addressing false discoveries in network inference. Bioinformatics, 31(17), 2836-43.

Geistlinger L, Csaba G, Dirmeier S, Küffner R, Zimmer R (2013) A comprehensive gene regulatory network for the diauxic shift in Saccharomyces cerevisiae. Nucleic Acids Research, 41(18), 8452-63.

Kurome M, Geistlinger L*, Kessler B, Zakhartchenko V, Klymiuk N, Wuensch A, Richter A, Baehr A, Kraehe K, Burkhardt K, Flisikowski K, Flisikowska T, Merkl C, Landmann M, Durkovic M, Tschukes A, Kraner S, Schindelhauer D, Petri T, Kind A, Nagashima H, Schnieke A, Zimmer R, Wolf E (2013) Factors influencing the efficiency of generating genetically engineered pigs by nuclear transfer: multi-factorial analysis of a large data set. BMC Biotechnology, 13, 43.

Geistlinger L, Csaba G, Küffner R, Mulder N, Zimmer R (2011) From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems. Proceedings of the ISMB/ECCB 2011, Bioinformatics, 27(13), i366-73.

Wang Z, Ding G, Geistlinger L, Li H, Liu L, Zeng R, Tateno Y, Li Y (2011) Evolution of protein phosphorylation for distinct functional modules in vertebrate genomes. Molecular Biology and Evolution, 28(3), 1131-40.

Marzi C, Albrecht E, Hysi P, Lagou V, Waldenberger M, Toenjes A, Prokopenko I, Heim K, Blackburn H, Ried J, Kleber M, Mangino M, Thorand B, Peters A, Hammond C, Grallert H, Boehm B, Kovacs P, Geistlinger L, Prokisch H, Winkelmann B, Spector T, Wichmann H, Stumvoll M, Soranzo N, Maerz W, Koenig W, Illig T, Gieger C (2010) Genome-wide association study identifies two novel regions at 11p15.5-p13 and 1p31 with major impact on acute-phase serum amyloid A. PLoS Genetics, 6(11), e1001213.

Gieger C, Geistlinger L, Altmaier E, Angelis M, Kronenberg F, Meitinger T, Mewes HW, Wichmann HE, Weinberger KM, Adamski J, Illig T, Suhre K (2008) Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum. PLoS Genetics, 4(11), e1000282.