Publications

Diniz WJS, Mazzoni G, Coutinho LL, Banerjee P, Geistlinger L, Cesar ASM, Bertolini F, Afonso J, de Oliveira PSN, Tizioto PC, Kadarmideen HN, Regitano LCA. Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle. Front Genet. 2019 Mar 13;10:210. doi: 10.3389/fgene.2019.00210. eCollection 2019.

Palamar JJ, Le A, Mateu-Gelabert P. Perceived Risk of Heroin in Relation to Other Drug Use in a Representative US Sample. J Psychoactive Drugs. 2019 Jun 22:1-10. doi: 10.1080/02791072.2019.1632506. [Epub ahead of print]

Yotebieng M, Brazier E, Addison D, Kimmel AD, Cornell M, Keiser O, Parcesepe AM, Onovo A, Lancaster KE, Castelnuovo B, Murnane PM, Cohen CR, Vreeman RC, Davies MA, Duda SN, Yiannoutsos CT, Bono RS, Agler R, Bernard C, Syvertsen JL, Sinayobye JD, Wikramanayake R, Sohn AH, von Groote PM, Wandeler G, Leroy V, Williams CF, Wools-Kaloustian K, Nash D; IeDEA Treat All in sub-Saharan Africa Consensus Statement Working Group. Research priorities to inform "Treat All" policy implementation for people living with HIV in sub-Saharan Africa: a consensus statement from the International epidemiology Databases to Evaluate AIDS (IeDEA). J Int AIDS Soc. 2019 Jan;22(1):e25218. doi: 10.1002/jia2.25218.

Millar BM, Rendina HJ, Starks TJ, Grov C, Parsons JT. The role of chronotype, circadian misalignment, and tiredness in the substance use behaviors of gay and bisexual men. Psychol Sex Orientat Gend Divers. 2019 Mar;6(1):96-106. doi: 10.1037/sgd0000311. Epub 2018 Nov 5.

Tymejczyk O, Brazier E, Yiannoutsos CT, Vinikoor M, van Lettow M, Nalugoda F, Urassa M, Sinayobye JD, Rebeiro PF, Wools-Kaloustian K, Davies MA, Zaniewski E, Anderegg N, Liu G, Ford N, Nash D; IeDEA consortium. Changes in rapid HIV treatment initiation after national "treat all" policy adoption in 6 sub-Saharan African countries: Regression discontinuity analysis. PLoS Med. 2019 Jun 10;16(6):e1002822. doi: 10.1371/journal.pmed.1002822. eCollection 2019 Jun.

Weinberger AH, Delnevo CD, Zhu J, Gbedemah M, Lee J, Cruz LN, Kashan RS, Goodwin RD. Trends in Cigar Use in the United States, 2002 to 2016: Diverging Trends by Race/Ethnicity. Nicotine Tob Res. 2019 Apr 23. pii: ntz060. doi: 10.1093/ntr/ntz060. [Epub ahead of print]

Weinberger AH, Pacek LR, Sheffer CE, Budney AJ, Lee J, Goodwin RD. Serious psychological distress and daily cannabis use, 2008 to 2016: Potential implications for mental health? Drug Alcohol Depend. 2019 Feb 14;197:134-140. doi: 10.1016/j.drugalcdep.2019.01.010. [Epub ahead of print]

Palamar JJ, Le A, Guarino H, Mateu-Gelabert P. A comparison of the utility of urine- and hair testing in detecting self-reported drug use among young adult opioid users. Drug Alcohol Depend. 2019 May 22;200:161-167. doi: 10.1016/j.drugalcdep.2019.04.008. [Epub ahead of print]

Cribbs K, Lynch S, LaMonica M, Joshi A. Enhancing Graduate Practicum Project Development and Selection at Schools of Public Health: A Case Study. Pedagogy in Health Promotion. 2019 Apr 9.

Kim JH. State-level relationships cannot tell us anything about individuals, but what they tell us about states should still be of interest. Addiction. 2019 Jan 24. doi: 10.1111/add.14543. [Epub ahead of print]

Thomas AM, Manghi P, Asnicar F, Pasolli E, Armanini F, Zolfo M, Beghini F, Manara S, Karcher N, Pozzi C, Gandini S, Serrano D, Tarallo S, Francavilla A, Gallo G, Trompetto M, Ferrero G, Mizutani S, Shiroma H, Shiba S, Shibata T, Yachida S, Yamada T, Wirbel J, Schrotz-King P, Ulrich CM, Brenner H, Arumugam M, Bork P, Zeller G, Cordero F, Dias-Neto E, Setubal JC, Tett A, Pardini B, Rescigno M, Waldron L, Naccarati A, Segata N. Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation. Nat Med. 2019 Apr 1. doi: 10.1038/s41591-019-0405-7. [Epub ahead of print]

John SA, Starks TJ, Rendina HJ, Parsons JT, Grov C. High willingness to use novel HIV and bacterial sexually transmitted infection partner notification, testing, and treatment strategies among gay and bisexual men. Sex Transm Infect. 2019 Jun 12. pii: sextrans-2019-053974. doi: 10.1136/sextrans-2019-053974. [Epub ahead of print]

Hirshfield S, Downing MJ Jr, Chiasson MA, Yoon IS, Houang ST, Teran RA, Grov C, Sullivan PS, Gordon RJ, Hoover DR, Parsons JT. Evaluation of Sex Positive! A Video eHealth Intervention for Men Living with HIV. AIDS Behav. 2019 Apr 22. doi: 10.1007/s10461-019-02498-5. [Epub ahead of print]

Kong AM, Pozen A, Anastos K, Kelvin EA, Nash D. Non-HIV Comorbid Conditions and Polypharmacy Among People Living with HIV Age 65 or Older Compared with HIV-Negative Individuals Age 65 or Older in the United States: A Retrospective Claims-Based Analysis. AIDS Patient Care STDS. 2019 Mar;33(3):93-103. doi: 10.1089/apc.2018.0190.

Katzman C, Mateu-Gelabert P, Kapadia SN, Eckhardt BJ. Contact tracing for hepatitis C: The case for novel screening strategies as we strive for viral elimination. Int J Drug Policy. 2019 Apr 19. pii: S0955-3959(19)30097-0. doi: 10.1016/j.drugpo.2019.04.003. [Epub ahead of print]

Weinberger AH, Giovenco DP, Zhu J, Lee J, Kashan RS, Goodwin RD. Racial/ethnic differences in daily, nondaily, and menthol cigarette use and smoking quit ratios in the United States: 2002 to 2016. Prev Med. 2019 Apr 17. pii: S0091-7435(19)30133-1. doi: 10.1016/j.ypmed.2019.04.009. [Epub ahead of print]

Waldron L, Schiffer L, Azhar R, Ramos M, Geistlinger L, Segata N. Improving Accessibility of the Human Microbiome Project Data Through Integration With R/Bioconductor. Am J Epidemiol. 2019 Jan 23. doi: 10.1093/aje/kwz008. [Epub ahead of print]

Wirbel J, Pyl PT, Kartal E, Zych K, Kashani A, Milanese A, Fleck JS, Voigt AY, Palleja A, Ponnudurai R, Sunagawa S, Coelho LP, Schrotz-King P, Vogtmann E, Habermann N, Niméus E, Thomas AM, Manghi P, Gandini S, Serrano D, Mizutani S, Shiroma H, Shiba S, Shibata T, Yachida S, Yamada T, Waldron L, Naccarati A, Segata N, Sinha R, Ulrich CM, Brenner H, Arumugam M, Bork P, Zeller G. Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer. Nat Med. 2019 Apr 1. doi: 10.1038/s41591-019-0406-6. [Epub ahead of print]

McNairy ML, Tymejczyk O, Rivera V, Seo G, Dorélien A, Peck M, Petion J, Walsh K, Bolgrien A, Nash D, Pape J, Fitzgerald DW. High Burden of Non-communicable Diseases among a Young Slum Population in Haiti. J Urban Health. 2019 Jun 19. doi: 10.1007/s11524-019-00368-y. [Epub ahead of print]

Beghini F, Renson A, Zolnik CP, Geistlinger L, Usyk M, Moody TU, Thorpe L, Dowd JB, Burk R, Segata N, Jones HE, Waldron L. Tobacco exposure associated with oral microbiota oxygen utilization in the New York City Health and Nutrition Examination Study. Ann Epidemiol. 2019 Mar 28. pii: S1047-2797(18)30677-X. doi: 10.1016/j.annepidem.2019.03.005. [Epub ahead of print]

Gopaulakrishnan S, Pollack S, Stubbs BJ, Pagès H, Readey J, Davis S, Waldron L, Morgan M, Carey V. restfulSE: A semantically rich interface for cloud-scale genomics with Bioconductor. F1000Res. 2019 Jan 7;8:21. doi: 10.12688/f1000research.17518.1. eCollection 2019.

Meylakhs P, Friedman SR, Meylakhs A, Mateu-Gelabert P, Ompad DC, Alieva A, Dmitrieva A. A New Generation of Drug Users in St. Petersburg, Russia? HIV, HCV, and Overdose Risks in a Mixed-Methods Pilot Study of Young Hard Drug Users. AIDS Behav. 2019 Apr 11. doi: 10.1007/s10461-019-02489-6. [Epub ahead of print]

Kelvin EA, George G, Kinyanjui S, Mwai E, Romo ML, Oruko F, Odhiambo JO, Nyaga EN, Mantell JE, Govender K. Announcing the availability of oral HIV self-test kits via text message to increase HIV testing among hard-to-reach truckers in Kenya: a randomized controlled trial. BMC Public Health. 2019 Jan 3;19(1):7. doi: 10.1186/s12889-018-6345-1.

Robertson MM, Braunstein SL, Hoover DR, Li S, Nash D. Timeliness of HIV Diagnosis and Antiretroviral Treatment Initiation in the Era of Universal Test and Treat. J Infect Dis. 2019 Apr 4. pii: jiz148. doi: 10.1093/infdis/jiz148. [Epub ahead of print]

Weinberger AH, Pacek LR, Wall MM, Gbedemah M, Lee J, Goodwin RD. Cigarette smoking quit ratios among adults in the USA with cannabis use and cannabis use disorders, 2002-2016. Tob Control. 2019 Apr 5. pii: tobaccocontrol-2018-054590. doi: 10.1136/tobaccocontrol-2018-054590. [Epub ahead of print]